[CGNS/ParaView] Add new ports (#9960)

* [cgns] add port cgns

* [paraview] add new port

* [paraview] correct dependencies; disable catalyst

* [VTK/ParaView] Make ParaView build

* [paraview] add missing patch

* [paraview] add cgns patch

* [paraview] add qt plugin patches back in. Remove in the future

* [vtk] slightly improved patches

* [vtk] don't disable findPython

* [paraview] add more features

* [paraview] remove X11Extras from OSX

* [vtk] make vtk workcorrectly with python and prepare for paraview with python

* [paraview] Python fixes

* [paraview] small bin -> lib replacement fix for static builds

* [vtk] fix patch path

* update baseline to exclude paraview for the time being on osx and linux.
requires a fix in qt5-base linkage of libpq.

* [paraview]try setting LD_LIBRARY_PATH for unix systems

* [paraview] a bit of cleanup

* update baseline

* fix typo in baseline

* [paraview] remove unnecessary patch

* [vtk] replace custom patch with upstream patch

* [paraview] cleanup in the portfile.

* Update ports/paraview/CONTROL

Co-authored-by: Jack·Boos·Yu <47264268+JackBoosY@users.noreply.github.com>

1 files changed, 107 insertions, 0 deletions

diff --git a/ports/paraview/VisIt_Build.patch b/ports/paraview/VisIt_Build.patch
new file mode 100644
index 000000000..fb676a737
--- /dev/null
+++ b/ports/paraview/VisIt_Build.patch
@@ -0,0 +1,107 @@
+diff --git a/databases/readers/CEAucd/vtkCEAucdReader.C b/databases/readers/CEAucd/vtkCEAucdReader.C
+index 0ad9a828a..cf37beb86 100644
+--- a/databases/readers/CEAucd/vtkCEAucdReader.C
++++ b/databases/readers/CEAucd/vtkCEAucdReader.C
+@@ -172,7 +172,7 @@ const char *vtkCEAucdReader::GetByteOrderAsString()
+    }
+ }
+ 
+-void vtkCEAucdReader::SetFileStream( ifstream* istr )
++void vtkCEAucdReader::SetFileStream( std::ifstream* istr )
+ {
+    if( istr == this->FileStream ) return;
+ 
+@@ -311,9 +311,9 @@ int vtkCEAucdReader::RequestInformation(
+    {
+       vtkDebugMacro(<<"Open file "<<this->FileName<<"\n");
+ #ifdef _WIN32
+-      this->FileStream = new ifstream(this->FileName, ios::in | ios::binary);
++      this->FileStream = new std::ifstream(this->FileName, std::ios::in | std::ios::binary);
+ #else
+-      this->FileStream = new ifstream(this->FileName, ios::in);
++      this->FileStream = new std::ifstream(this->FileName, std::ios::in);
+ #endif
+    }
+ 
+@@ -340,7 +340,7 @@ int vtkCEAucdReader::RequestInformation(
+          vtkDebugMacro(<<"Re-open file "<<this->FileName<<" in ASCII mode");
+          delete this->FileStream; // close file to reopen it later
+          this->FileStream = NULL;
+-         this->FileStream = new ifstream(this->FileName, ios::in);
++         this->FileStream = new std::ifstream(this->FileName, std::ios::in);
+       }
+       
+       char c='\0', buf[100];
+diff --git a/databases/readers/CEAucd/vtkCEAucdReader.h b/databases/readers/CEAucd/vtkCEAucdReader.h
+index c3a86c16b..434556488 100644
+--- a/databases/readers/CEAucd/vtkCEAucdReader.h
++++ b/databases/readers/CEAucd/vtkCEAucdReader.h
+@@ -49,7 +49,7 @@ class vtkCEAucdReader : public vtkUnstructuredGridAlgorithm
+    public:
+       static vtkCEAucdReader *New();
+       vtkTypeMacro(vtkCEAucdReader,vtkUnstructuredGridAlgorithm);
+-      void PrintSelf(ostream& os, vtkIndent indent) override;
++      void PrintSelf(std::ostream& os, vtkIndent indent) override;
+       
+      // Description:
+      // Specify file name of CEA UCD datafile to read
+@@ -120,7 +120,7 @@ class vtkCEAucdReader : public vtkUnstructuredGridAlgorithm
+       vtkSetStringMacro(ActivePointArray);
+       vtkGetStringMacro(ActivePointArray);
+       
+-      void SetFileStream( ifstream* istr );
++      void SetFileStream( std::ifstream* istr );
+ 
+      // Description:
+      // The following methods allow selective reading of solutions fields.  by
+@@ -173,7 +173,7 @@ class vtkCEAucdReader : public vtkUnstructuredGridAlgorithm
+       vtkIdType * PointsInMaterial;
+       vtkIdType * CellIndexInMaterial;
+       
+-      ifstream *FileStream;
++      std::ifstream *FileStream;
+       long GlobalOffset;
+       long FileSize;
+       bool OwnStream;
+diff --git a/databases/readers/Image/vtkStimulateReader.C b/databases/readers/Image/vtkStimulateReader.C
+index be91dc91e..aeec88891 100644
+--- a/databases/readers/Image/vtkStimulateReader.C
++++ b/databases/readers/Image/vtkStimulateReader.C
+@@ -104,7 +104,6 @@ int vtkStimulateReader::OpenFile(void)
+   // Close file from any previous image
+   if (this->File)
+     {
+-    this->File->close();
+     delete this->File;
+     this->File = NULL;
+     }
+@@ -122,9 +121,9 @@ int vtkStimulateReader::OpenFile(void)
+   if ( !FileFunctions::VisItStat( sdt_name, &fs) )
+     {
+ #ifdef _WIN32
+-    this->File = new ifstream(sdt_name, ios::in | ios::binary);
++    this->File = new std::ifstream(sdt_name, std::ios::in | std::ios::binary);
+ #else
+-    this->File = new ifstream(sdt_name, ios::in);
++    this->File = new std::ifstream(sdt_name, std::ios::in);
+ #endif
+     }
+   if (! this->File || this->File->fail())
+@@ -246,7 +245,7 @@ int vtkStimulateReader::CanReadFile(const char* fname)
+     return 0;
+     }
+   
+-  ifstream sdt_file(sdt_name);
++  std::ifstream sdt_file(sdt_name);
+   if (sdt_file.fail())
+     {
+     vtkErrorMacro(<<"Cannot read file: invalid sdt_file " << sdt_name);
+@@ -266,7 +265,7 @@ bool vtkStimulateReader::ReadSPRFile(const char *spr_name)
+   haveReadSPRFile = true;
+   validSPRFile = false;
+ 
+-  ifstream spr_file(spr_name);
++  std::ifstream spr_file(spr_name);
+   if (spr_file.fail())
+     {
+     vtkErrorMacro(<<"Unable to read SPR file " << spr_name << ": file "