[vcpkg/scripts/make] trying to iron out some issues (#11836)

* take changes from fontconfig pr

* [farmhash] add autoconf

* [freexl] add autoconf

* [healpix] add autoconf

* [libb2] add autoconf

* [libwandio] add autoconf and patch

* more autoconf

* [x264] fix windows build issues

* minimal cleanup

* [libwandio] some fixes

* [vcpkg/scripts/make] add include to C/CXX flags correctly set machine flags for linker

* remove unnecessary comments part 1

* cleanup part 2

* cleanup

* remove unnecessary code

* [pbc] fix osx regressions

* [lzokay] format manifest

* try to copy sources to fix build issues

* add autoconfig to force updated configure scripts

* bump port versions of openmpi and ocilib

* added lib paths back into vcpkg_build_make because they are probably required

* Use CPP flags
add quotes around restoring of ENV
add LIB and LIBPATH correctly

* Apply suggestions from code review

Co-authored-by: ras0219 <533828+ras0219@users.noreply.github.com>

* Apply more changes forom CR
- remove mingw make
- add doc for missing options
- introduce two new macros for backup/restore of env vars

* fix wrong variables.

* use the list macro instead of the single var macro

* also use it at the top

Co-authored-by: Jack·Boos·Yu <47264268+JackBoosY@users.noreply.github.com>
Co-authored-by: Nicole Mazzuca <mazzucan@outlook.com>
Co-authored-by: ras0219 <533828+ras0219@users.noreply.github.com>

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